Multi-View Network
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Save the data to PARSE DB

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Settings

Cutoff of relatedness:



  • 2-level network
  • barplot (codes in both MGB&BCH)
  • barplot (codes in only MGB)
  • barplot (codes in only BCH)



Clicked node info:


Instruction

multi-view-net

Input Data

Upload the data

1. Upload the cos data from different datasets(csv/csv.zip).

A data.frame. Field:

  • from: center nodes.
  • to: connected nodes.
  • MGB: the weight of the collection in MGB dataset. e.g. cosine similarity.
  • BCH: the weight of the collection in BCH dataset. e.g. cosine similarity.
  • groupid: the group id for the column of to. Use “Group” to indicate the group node.

demo:

from to MGB BCH groupid
PheCode:251.1 PheCode:008 0.0148 0.00800 PheCode:008
PheCode:251.1 PheCode:008.5 -0.00426 0.0399 PheCode:008
PheCode:251.1 PheCode:008.52 -0.00528 0.0504 PheCode:008
PheCode:251.1 PheCode:008.6 0.0676 0.00272 PheCode:008
PheCode:251.1 PheCode:008.7 -0.00954 -0.00663 PheCode:008
PheCode:251.1 PheCode:008.51 0 -0.00334 PheCode:008
PheCode:251.1 PheCode:008 -0.000149 -0.00244 Group

2. Upload the description data(csv). Dictionary for nodes.

A data.frame. Field:

  • id: The unique key. (e.g. PheCode:008)
  • description: The description/name/string of the code. (e.g. intestinal infection)
  • category: The Category of the node. (e.g. PheCode)
  • group: The description/name/string of the group id. (e.g. intestinal infection)
  • groupid: The group id for the node. (e.g. PheCode:008)
  • dataset: The dataset of the node. (e.g. MGB, BCH)

demo:

id description category group groupid dataset
PheCode:008 intestinal infection PheCode intestinal infection PheCode:008 MGB, BCH
PheCode:008.5 bacterial enteritis PheCode intestinal infection PheCode:008 MGB, BCH
PheCode:008.51 Intestinal e.coli PheCode intestinal infection PheCode:008 MGB, BCH
PheCode:008.52 Intestinal infection due to C. difficile PheCode intestinal infection PheCode:008 MGB, BCH
PheCode:008.6 viral enteritis PheCode intestinal infection PheCode:008 MGB, BCH
PheCode:008.7 intestinal infection due to protozoa PheCode intestinal infection PheCode:008 MGB, BCH

3. Save to the DB

  • Upload the csv file of cos data and description data.
  • When upload complete, Press conform to read the data to the server.
  • Enter the name of the data (e.g. MGB_BCH_v20230206), Press the Write to database.
  • When upload complete, a success window will be popup. Press OK.

Local data

When the data uploaded have been saved to PARSE DB, the database’s name will be found at the local data.